COURSE LITERATURE

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Please ask Organizing Committee for article site references and download instructions via E-mail address <contact@arriam.spb.ru>

TEXTBOOK (COMPULSORY reading):

Chapter 14. Tikhonovich I.A., Provorov N.A. Beneficial plant-microbe interactions (2007) In book: Comprehensive and Molecular Phytopathology. Editors Yu. T. Dyakov, V.G.Dzhavakhiya (Russia) and T. Korpela (Finland) Elsevier, 57 p.
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ARTICLES (SUPPLEMENTARY supporting material):

Arrighi J.-F., Barre A., Ben Amor B., Bersoult Anne, Campos Soriano L., Mirabella R., de Carvalho-Niebel F., Journet E-P, Gherardi M., Huguet T., Geurts R., Denarie J., Rouge P., and Gough C. (2006) The Medicago truncatula   Lysine Motif-Receptor-Like Kinase Gene Family Includes NFP and New Nodule-Expressed Genes1[w]/ Plant Physiology, 142, 265-279.

Bailly X., Olivieri I., Brunel B., Cleyet-Marel J-C., Bena J. Horizontal gene transfer and homologous recombination drive the evolution of the nitrogen-fixing symbionts of Medicago   species. Submitted as a Full-Length Paper.

Bena J., Lyet A., Huguet T., Olivieri I.(2005) Medicago - Smorhizobium   symbiotic specificity evolution and the geographic expansion of Medicago / J.Evol.Biol. 18, 1547-1558.

Berg B., Krechel A., Ditz M., Sikora R.A., Ulrich A., Hallmann J. (2005) Endophytic and ectophytic potato-associated bacterial communities differ in structure and antagonistic function against plant pathogenic fungi / FEMS Microbiology Ecology, 51, 215-229.

Berg G., Leo Eberl L. and Hartmann A.(2005) The rhizosphere as a reservoir for opportunistic human pathogenic bacteria (Minireview) / Environmental Microbiology, 7(11), 1673-1685.

Berg G., Opelt K., Zachow C, Lottmann J., Gotz M. Costa R. & Smalla K. (2006) The rhizosphere effect on bacteria antagonistic towards the pathogenic fungus Verticillium differs   depending on plant species and site / FEMS Microbiol. Ecol. 56, 250-261.

Berg G., Zachow C., Lottmann J., Gotz M., Costa R. and Smalla K. (2005) Impact of Plant Species and Site on Rhizosphere-Associated Fungi Antagonistic to Verticillium dahliae  Kleb. / Applied and Environmental Microbiology, Vol. 71, No. 8, 4203-4213.

Bomberg M. and Sari Timonen (2007) Distribution of Cren- and Euryarchaeota in Scots Pine Mycorrhizospheres and Boreal Forest Humus / Microbial Ecology (In press).

Costa R., Falcao Salles J., Berg J. and Smalla K.(2006) Cultivation-independent analysis of Pseudomonas   species in soil and in the rhizosphere of field-grown Verticillium dahliae   host plants / Environmental Microbiology 8(12), 2136-2149.

Dresler-Nurmi A., Fewer D.P., Rasanen L.A. and Lindstrom K. The diversity and evolution of rhizobia .

Faltin F., Lottmann J., Grosch R., and Berg G. (2004) Strategy to select and assess antagonistic bacteria for biological control of Rhizoctonia solani  Kiihn / Can. J. Microbiol. 50, 811-820.

Fedorova E.E., de Felipe M.R., Pueyo J.J. and Lucas M.M. (2007) Conformation of Cytoskeletal elements during the division of infected Lupinus albus   L. nodule cells / Journal of Experimental Botany, May 24, 2007

Galibert F., Finan T.M., Long S.R., Puhler A. et al. (2001) The Composite Genome of the Legume Symbiont Sinorhizobium meliloti / Science, Vol. 293, 668–672

Garcia-Arenal F., Fraile A., and Malpica J.M. (2001) Variability and Genetic Structure of Plant Virus Populations / Annu. Rev. Phytopathol., 39: 157-86.

Grosch R., Faltin F., Lottmann J., Kofoet A. and Berg G. (2005) Effectiveness of 3 antagonistic bacterial isolates to control Rhizoctonia solani   Kuhn on lettuce and potato. / Can. J. Microbiol. 51, 345-353.

Grosch R., Scherwinski K., Lottmann J. and Berg G. (2006) Fungal antagonists of the plant pathogen Rhizoctonia solani : selection, control efficacy and influence on the indigenous microbial community / Mycological Research, 110, 1464-1474.

Kamilova F., Kravchenko L.V., Shaposhnikov A.I., Azarova T., Makarova N., and Lugtenberg B. (2006) Organic Acids, Sugars, and L-Tryptophane in Exudates of Vegetables Growing on Stonewool and Their Effects on Activities of Phizosphere Bacteria / MPMI, Vol. 19, №3, 250-256.

Kamilova F., Kravchenko L.V., Shaposhnikov A.I., Makarova N., and Lugtenberg B. (2006) Effects of the Tomato Pathogen Fusarium ozysporum  : f sp. radicis-lycopersici  : and Biocontrol Bacterium Pseudomonas fluorescens  : WCS365 on the Composition of Organic Acids and Sugars in Tomato Root Exudate / MPMI, Vol. 19, № 10, 1121-1126.

Karlsson M., Olson A., Stenlid J. (2003) Expressed sequences from the basidiomycetous tree pathogen Heterobasidion annosum  : during early infection of scots pine / Fungal Genetics and Biology, 39, 51-59.

Laine A.-L. (2005) Spatial scale of local adaptation in a plant-pathogen metapopulation / J.Evol. Biol., 18, 930-938.

Laine A.-L. (2007) Detecting local adaptation in a natural plant - pathogen metapopulation: a laboratory vs. field transplant approach / Journal compilation © European Society for Evolutionary Biology (In press).

Lind M., Olson A., Stenlid J. (2005) An AFLP-markers based genetic linkage map of Heterobasidion annosum  locating intersterility genes / Fungal Genetics and Biology, 42, 519-527.

Lindstrom K., Kokko-Gonzales P., Terefework Z. and Rasanen L.A. (2006) Chapter 14 Differentiation of Nitrogen-fixing Legume Root Nodule Bacteria (Rhizobia) / © CAB International, Molecular Techniques for Soil, Rhizosphere and Plant Microorganizms (Cooper and Rao).

Marquez L.M., Redman R.S., Rodriguez R.J., Roossinck M.J. (2007) A Virus in a Fungus in a Plant: Three-Way Symbiosis Required for Thermal Tolerance / Science, Vol. 315, 513-515.

Opelt K., Berg C. & Berg G. (2004) The bryophyte genus Sphagnum  is a reservoir for powerful and extraordinary antagonists and potentially facultative human pathogens / FEMS Microbiol. Ecol. (In press).

Opelt K., Berg G. (2004) Diversity and Antagonistic Potential of Bacteria Associated with Bryophytes from Nutrient-Poor Habitats of the Baltic Sea Coast / Applied and Environmental Microbiology, Vol. 70, №11, 6569-6579.

Sandal N., Petersen T.R., Murray J., Umehara Y., Karas B. et al. (2006) Genetics of Symbiosis in Lotus japonicus  : Recombinant Inbred Lines, Comparative Genetic Maps, and Map Position of 35 Symbiotic Loci/ MPMI, Vol. 19, No. 1, 80-91.

Scherwinski K., Wolf A., Berg G. (2007) Assessing the risk of biological control agents on the indigenous microbial communities: Serratia plymuthica  HRO-C48 and Streptomyces   sp. HRO-71 as model bacteria / BioControl 52 (1), 87-112.

Selbitschka W., Keller M., Miethling-Graff R., Dresing U., Schwieger F., Krahn I., Homann I., Dammann-Kalinowski T., Puhler A. and Tebbe C.C. (2006) Long-Term Field Release of Bioluminescent Smorhizobium meliloti  Strains to Assess the Influence of a recA   Mutation on the Strains' Survival / Microbial Ecology, 52, 583-595.

Sessitsch A., Reiter B., and Berg G. (2004) Endophytic bacterial communities of field-grown potato plants and their plant-growth-promoting and antagonistic abilities /Can. J. Microbiol., 50, 239-249.

Smit P., Raedts J., Portyanko V., Debelle F., Cough C., Bisseling T., Geurts R.(2005) NSP1 of the GRAS Protein Family Is Essential for Rhizobial Nod Factor-Induced Transcription / Science, Vol. 308, 1789-1791.

Stiens M., Schneiker S., M. Keller M., Kuhn S., A. Puhler A. and Schluter A. (2006) Sequence Analysis of the 144-Kilobase Accessory Plasmid pSmeSM11a, Isolated from a Dominant Sinorhizobium meliloti   Strain Identified during a Long-Term Field Release Experiment / Applied and Environmental Microbiology vol. 72, no. 5, 3662-3672.

Timonen S. and Hurek T. (2006) Characterization of culturable bacterial populations associating with Pinus sylvestris – Suillus bovinus   mycorrhizospheres / Can. J. Microbiol., 52, 769-778.

Tirichine L., Imaizumi-Anraku H., Yoshida S., Murakami Y., Madsen L.H., Miwa H., Nakagawa T., Sandal N., Albrektsen A.S., Kawaguchi M., Downie A., Sato S., Tabata S., Kouchi H., Parniske M., Kawasaki S., and Stougaard J. (2006) Deregulation of a Ca2+/calmodulin-dependent kinase leads to spontaneous nodule development / Nature Letters, Vol 441/29 1153-1156

Tirichine L., James E.K., Sandal N., and Stougaard J. (2006) Spontaneous Root-Nodule Formation in the Model Legume Lotus japonicus: A Novel Class of Mutants Nodulates in the Absence of Rhizobia / MPMI Vol. 19, No. 4, 373-382.

Tirichine L., Sandal N., Madsen L.H., Radutoiu S., Albrektsen A.S., Sato S., Erika Asamizu E., Tabata S., Stougaard J.(2007) A Gain-of-Function Mutation in a Cytokinin Receptor Triggers Spontaneous Root Nodule Organogenesis / Science, Vol. 315, 104-107.

Uroz S., D'Angelo-Picard C., Carlier A., Elasri M., Sicot C., Petit A., Oger P., Faure D. and Dessaux Y. (2003), Novel bacteria degrading /V-acylhomoserine lactones and their use as quenchers of quorum-sensing-regulated functions of plant-pathogenic bacteria / Microbiology 149, 1981-1989.

Von Bodman S.V., Bauer W.D. and Coplin D.L. (2003), Quorum Sensing in Plant-Pathogenic Bacteria / Annu. Rev. Phytopathol. 41, 455-82.

Zhu H., Riely B.K., Burns N.J. and Ane J.-M. (2006) Tracing Nonlegume Orthologs of Legume Genes Required for Nodulation and Arbuscular Mycorrhizal Symbioses / Genetics 172, 2491-2499.